Make an inversion

Make an inversion

Usage

makeInversion.chr(gr, dist = runif)

Arguments

gr

GenomicRanges object

dist

Distribution function for new breakpoints on gr's sequence levels.

Examples

gr <- GRanges("chr1:1-1000000:+")
gr2 <- GRanges(c("chr1:1-1000000:+", "chr2:1-1000000:+"))
gr3 <- GRanges(c("chr1:1-1000000:+", "chr1:1000000-2000000:+"))
gr4 <- GRanges(c("chr1:1-1000000:+", "chr1:1000000-2000000:-"))
gr5 <- GRanges(c("chr1:1-1000000:-"))